Strategy of intelligent cognitive control systems of ill-defined control objects based on quantum and soft computing presented. Quantum self-organization knowledge base synergetic effect extracted from intelligent fuzzy controller’s imperfect knowledge bases described. That technology improved of robustness of intelligent cognitive control systems in hazard control situations described with different types of robot cooperation. Examples demonstrated the introduction of quantum fuzzy inference gate design as prepared programmable algorithmic solution for board embedded control systems. The physical interpretation of the process of controlling self-organization at the quantum level is discussed on the basis of quantum information-thermodynamic models of exchange and extraction of quantum (hidden) valuable information from/between classical particle trajectories in the "swarm of interacting particles" model. The main physical and information-thermodynamic aspects of the model of quantum intelligent control of classical control objects are discussed and described. An approach is considered for constructing reference control models based on new laws of quantum deep machine learning applying neural networks in mega-science project NICA.